allow STRT-seq to run SC5P-R1 chemistry without R2 input files #291
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| name: Docker build image | ||
| on: workflow_dispach | ||
| jobs: | ||
| test-build: | ||
| runs-on: ubuntu-20.04 | ||
| steps: | ||
| - uses: actions/checkout@v2 | ||
| - uses: docker/login-action@v1 | ||
| with: | ||
| username: ${{ secrets.DOCKER_HUB_USERNAME }} | ||
| password: ${{ secrets.DOCKER_HUB_ACCESS_TOKEN }} | ||
| registry: ${{ env.REGISTRY }} | ||
| - name: Build the Docker image | ||
| run: docker build . --file Dockerfile --tag my-image-name:$(date +%s) | ||
| - name: Build and push | ||
| uses: docker/build-push-action@v2 | ||
| with: | ||
| context: ./ | ||
| file: ./Dockerfile | ||
| tags: ${{ secrets.DOCKER_HUB_USERNAME }}/universc:test | ||
| push: false | ||
| - name: Image digest | ||
| run: echo ${{ steps.docker_build.outputs.digest }} | ||
| - name: Status | ||
| run: echo "build complete" | ||
| - name: Hello world | ||
| run: docker run ${{ secrets.DOCKER_HUB_USERNAME }}/universc:test echo "hello world" | ||
| test-build-cache: | ||
| runs-on: ubuntu-20.04 | ||
| steps: | ||
| - uses: actions/checkout@v2 | ||
| - uses: docker/login-action@v1 | ||
| with: | ||
| username: ${{ secrets.DOCKER_HUB_USERNAME }} | ||
| password: ${{ secrets.DOCKER_HUB_ACCESS_TOKEN }} | ||
| registry: ${{ env.REGISTRY }} | ||
| - uses: satackey/[email protected] | ||
| # Ignore the failure of a step and avoid terminating the job. | ||
| continue-on-error: true | ||
| - name: Build the Docker image | ||
| run: docker build . --file Dockerfile --tag universc:$(date +%s) | ||
| - uses: satackey/[email protected] | ||
| continue-on-error: true | ||
| - name: Build from cache | ||
| uses: whoan/docker-build-with-cache-action@v5 | ||
| with: | ||
| username: ${{ secrets.DOCKER_HUB_USERNAME }} whoan | ||
| password: "${{ secrets.GITHUB_TOKEN }}" | ||
| registry: docker.pkg.github.com | ||
| image_name: test | ||
| - name: Build from cache | ||
| uses: whoan/docker-build-with-cache-action@v5 | ||
| with: | ||
| username: ${{ secrets.DOCKER_HUB_USERNAME }} | ||
| password: ${{ secrets.DOCKER_HUB_ACCESS_TOKEN }} | ||
| registry: ${{ env.REGISTRY }} | ||
| dockerfile: ./Dockerfile | ||
| image_name: test | ||
| - name: Image digest | ||
| run: echo ${{ steps.docker_build.outputs.digest }} | ||
| - name: Status | ||
| run: echo "build complete" | ||
| - name: Hello world | ||
| run: docker run ${{ secrets.DOCKER_HUB_USERNAME }}/universc:test echo "hello world" | ||
| test-call: | ||
| runs-on: ubuntu-20.04 | ||
| steps: | ||
| - uses: actions/checkout@v2 | ||
| - uses: docker/setup-buildx-action@v1 | ||
| - uses: docker/login-action@v1 | ||
| with: | ||
| username: ${{ secrets.DOCKER_HUB_USERNAME }} | ||
| password: ${{ secrets.DOCKER_HUB_ACCESS_TOKEN }} | ||
| registry: ${{ env.REGISTRY }} | ||
| - name: Build the Docker image | ||
| run: docker build . --file Dockerfile --tag universc:test | ||
| - name: Image digest | ||
| run: echo ${{ steps.docker_build.outputs.digest }} | ||
| - name: Status | ||
| run: echo "build complete" | ||
| - name: Call functions | ||
| run: docker run universc:test bash /universc/test/test_call.sh | ||
