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@gwlilabmit

Gene-Wei Li Lab

The lab group of Gene-Wei Li at Massachusetts Institute of Technology (Building 68, second floor)

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  1. Ram_Y_complex Ram_Y_complex Public

    Work accompanying Diverse Primary and Secondary Structural Features Are Associated With Y Complex-Dependent mRNA Maturation in Bacillus subtilis

    2

  2. Herzel2022_RNAdemographics Herzel2022_RNAdemographics Public

    This repository complements the manuscript "Ubiquitous mRNA decay fragments in E. coli redefine the functional transcriptome".

    Shell

  3. rendseq rendseq Public

    rendseq automates analysis of RendSeq data, right now can automatically identify peaks, more features coming soon!

    HTML 3

  4. UTR_Prediction UTR_Prediction Public

    Scratch notebooks for the prediction of 5' and 3' UTRs from Rend-seq data

    HTML

  5. IGVBrowse IGVBrowse Public

    A shiny app for browsing data with Rend-Seq

    R

  6. MTC_2023_Scripts MTC_2023_Scripts Public

    Collection of analysis scripts for processing raw data and generating figures for the MTC project

    Jupyter Notebook 2

Repositories

Showing 6 of 6 repositories
  • rendseq Public

    rendseq automates analysis of RendSeq data, right now can automatically identify peaks, more features coming soon!

    gwlilabmit/rendseq’s past year of commit activity
    HTML 0 MIT 3 17 (1 issue needs help) 1 Updated Jun 2, 2024
  • MTC_2023_Scripts Public

    Collection of analysis scripts for processing raw data and generating figures for the MTC project

    gwlilabmit/MTC_2023_Scripts’s past year of commit activity
    Jupyter Notebook 0 2 0 1 Updated Oct 23, 2023
  • IGVBrowse Public

    A shiny app for browsing data with Rend-Seq

    gwlilabmit/IGVBrowse’s past year of commit activity
    R 0 0 0 0 Updated Feb 1, 2023
  • UTR_Prediction Public

    Scratch notebooks for the prediction of 5' and 3' UTRs from Rend-seq data

    gwlilabmit/UTR_Prediction’s past year of commit activity
    HTML 0 0 0 0 Updated Jun 21, 2022
  • Herzel2022_RNAdemographics Public

    This repository complements the manuscript "Ubiquitous mRNA decay fragments in E. coli redefine the functional transcriptome".

    gwlilabmit/Herzel2022_RNAdemographics’s past year of commit activity
    Shell 0 0 0 0 Updated Feb 18, 2022
  • Ram_Y_complex Public

    Work accompanying Diverse Primary and Secondary Structural Features Are Associated With Y Complex-Dependent mRNA Maturation in Bacillus subtilis

    gwlilabmit/Ram_Y_complex’s past year of commit activity
    0 2 0 0 Updated Jan 16, 2020

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