CRAN release: qtl2pleio 1.3.0

Version 1.3.0 of qtl2pleio is now on CRAN.

Fix to logarithm base

We switch to using log10 likelihoods.

Functions for d-variate analysis

We now offer helper functions for testing pleiotropy and processing results of d-variate QTL scans (for $d \ge 2$). A new vignette serves as a guide to the functions. This extends the prior code that enabled bivariate analyses.

JOSS publication

Minor patch to fix .zenodo.json

JOSS publication

JOSS publication version, after fixing .zenodo.json.

JOSS publication, after fixing zenodo archive

We added .zenodo.json to ensure that the zenodo metadata - title and author list - correspond to those of paper.md

JOSS publication

This is the v1.0.0, which corresponds to the version that will be published by JOSS. We’ve implemented all revisions per peer review at JOSS.

JOSS submission

Submitted R package to Journal of Open Source Software

First release - for qtl2pleio manuscript

This pre-release contains the functions that we used for "A test to distinguish close linkage from pleiotropy in multiparental populations"