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Determines Y-Haplogroup Clade From Positive and Negative SNPs

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clade-finder

Determines Y-Haplogroup Clade From Positive and Negative SNPs

Installation

install pip3

Do not install pytabix using the --user paradigm. If you do, it will not be accessible by the apache www-data user. Instead, use sudo as below:

sudo pip3 install pytabix

#install pysam and pyvcf sudo apt-get install python3-pysam sudo apt-get install python3-pyvcf

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Determines Y-Haplogroup Clade From Positive and Negative SNPs

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  • Python 66.3%
  • PHP 28.5%
  • Shell 5.2%