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polyAsite3_hub.txt
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polyAsite3_hub.txt
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hub UCSCHub
shortLabel PolyAsite Atlas 3.0
longLabel PolyAsite Atlas 3.0
useOneFile on
email [email protected]
descriptionUrl https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/track_descriptions/Track_hub_description.html
genome hg38
defaultPos chr3:108042402-108047903
organism Homo Sapiens
track PAS_total
visibility full
shortLabel PAS clusters
longLabel PAS clusters, average TPM across all samples
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 22000
viewLimits 0:22000
autoScale on
maxHeighPixels 120:60:8
html https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/track_descriptions/PAS_clusters.html
track PAS_plus_strand
shortLabel PAS (+) strand
longLabel PolyA sites on (+) strand
parent PAS_total
color 4,177,216
type bigWig 0 22000
bigDataUrl https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/total/PAS.total.plus.bw
html https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/track_descriptions/PAS_clusters.html
track PAS_minus_strand
shortLabel PAS (-) strand
longLabel PolyA sites on (-) strand
parent PAS_total
color 255,68,51
type bigWig 0 22000
bigDataUrl https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/total/PAS.total.minus.bw
html https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/track_descriptions/PAS_clusters.html
track PAS_tissue_TPM_plus
visibility dense
shortLabel PAS tissue TPM (+) strand
longLabel PAS tissue TPM (+) strand
container multiWig
aggregate none
showSubtrackColorOnUi on
type bigWig 0 22000
viewLimits 0:22000
autoScale on
maxHeighPixels 120:60:8
html https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/track_descriptions/PAS_tissue_TPM_plus.html
track PAS_nose_TPM_plus_strand
shortLabel nose
longLabel PAS nose TPM (+) strand
parent PAS_tissue_TPM_plus
color 4,177,216
type bigWig 0 22000
bigDataUrl https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/over_tissues/nose.PAS.total.plus.bw
html https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/track_descriptions/PAS_tissue_TPM_plus.html
track PAS_trachea_TPM_plus_strand
shortLabel trachea
longLabel PAS trachea TPM (+) strand
parent PAS_tissue_TPM_plus
color 4,177,216
type bigWig 0 22000
bigDataUrl https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/over_tissues/trachea.PAS.total.plus.bw
html https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/track_descriptions/PAS_tissue_TPM_plus.html
track PAS_heart_TPM_plus_strand
shortLabel heart
longLabel PAS heart TPM (+) strand
parent PAS_tissue_TPM_plus
color 4,177,216
type bigWig 0 22000
bigDataUrl https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/over_tissues/heart.PAS.total.plus.bw
html https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/track_descriptions/PAS_tissue_TPM_plus.html
track PAS_intestine_TPM_plus_strand
shortLabel intestine
longLabel PAS intestine TPM (+) strand
parent PAS_tissue_TPM_plus
color 4,177,216
type bigWig 0 22000
bigDataUrl https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/over_tissues/intestine.PAS.total.plus.bw
html https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/track_descriptions/PAS_tissue_TPM_plus.html
track PAS_breast_TPM_plus_strand
shortLabel breast
longLabel PAS breast TPM (+) strand
parent PAS_tissue_TPM_plus
color 4,177,216
type bigWig 0 22000
bigDataUrl https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/over_tissues/breast.PAS.total.plus.bw
html https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/track_descriptions/PAS_tissue_TPM_plus.html
track PAS_bone_TPM_plus_strand
shortLabel bone
longLabel PAS bone TPM (+) strand
parent PAS_tissue_TPM_plus
color 4,177,216
type bigWig 0 22000
bigDataUrl https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/over_tissues/bone.PAS.total.plus.bw
html https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/track_descriptions/PAS_tissue_TPM_plus.html
track PAS_pancreas_TPM_plus_strand
shortLabel pancreas
longLabel PAS pancreas TPM (+) strand
parent PAS_tissue_TPM_plus
color 4,177,216
type bigWig 0 22000
bigDataUrl https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/over_tissues/pancreas.PAS.total.plus.bw
html https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/track_descriptions/PAS_tissue_TPM_plus.html
track PAS_eye_TPM_plus_strand
shortLabel eye
longLabel PAS eye TPM (+) strand
parent PAS_tissue_TPM_plus
color 4,177,216
type bigWig 0 22000
bigDataUrl https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/over_tissues/eye.PAS.total.plus.bw
html https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/track_descriptions/PAS_tissue_TPM_plus.html
track PAS_kidney_TPM_plus_strand
shortLabel kidney
longLabel PAS kidney TPM (+) strand
parent PAS_tissue_TPM_plus
color 4,177,216
type bigWig 0 22000
bigDataUrl https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/over_tissues/kidney.PAS.total.plus.bw
html https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/track_descriptions/PAS_tissue_TPM_plus.html
track PAS_penis_TPM_plus_strand
shortLabel penis
longLabel PAS penis TPM (+) strand
parent PAS_tissue_TPM_plus
color 4,177,216
type bigWig 0 22000
bigDataUrl https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/over_tissues/penis.PAS.total.plus.bw
html https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/track_descriptions/PAS_tissue_TPM_plus.html
track PAS_ureter_TPM_plus_strand
shortLabel ureter
longLabel PAS ureter TPM (+) strand
parent PAS_tissue_TPM_plus
color 4,177,216
type bigWig 0 22000
bigDataUrl https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/over_tissues/ureter.PAS.total.plus.bw
html https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/track_descriptions/PAS_tissue_TPM_plus.html
track PAS_lung_TPM_plus_strand
shortLabel lung
longLabel PAS lung TPM (+) strand
parent PAS_tissue_TPM_plus
color 4,177,216
type bigWig 0 22000
bigDataUrl https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/over_tissues/lung.PAS.total.plus.bw
html https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/track_descriptions/PAS_tissue_TPM_plus.html
track PAS_liver_TPM_plus_strand
shortLabel liver
longLabel PAS liver TPM (+) strand
parent PAS_tissue_TPM_plus
color 4,177,216
type bigWig 0 22000
bigDataUrl https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/over_tissues/liver.PAS.total.plus.bw
html https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/track_descriptions/PAS_tissue_TPM_plus.html
track PAS_skin_TPM_plus_strand
shortLabel skin
longLabel PAS skin TPM (+) strand
parent PAS_tissue_TPM_plus
color 4,177,216
type bigWig 0 22000
bigDataUrl https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/over_tissues/skin.PAS.total.plus.bw
html https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/track_descriptions/PAS_tissue_TPM_plus.html
track PAS_prostate_TPM_plus_strand
shortLabel prostate
longLabel PAS prostate TPM (+) strand
parent PAS_tissue_TPM_plus
color 4,177,216
type bigWig 0 22000
bigDataUrl https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/over_tissues/prostate.PAS.total.plus.bw
html https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/track_descriptions/PAS_tissue_TPM_plus.html
track PAS_uterus_TPM_plus_strand
shortLabel uterus
longLabel PAS uterus TPM (+) strand
parent PAS_tissue_TPM_plus
color 4,177,216
type bigWig 0 22000
bigDataUrl https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/over_tissues/uterus.PAS.total.plus.bw
html https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/track_descriptions/PAS_tissue_TPM_plus.html
track PAS_bloodImmune_TPM_plus_strand
shortLabel bloodImmune
longLabel PAS bloodImmune TPM (+) strand
parent PAS_tissue_TPM_plus
color 4,177,216
type bigWig 0 22000
bigDataUrl https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/over_tissues/bloodImmune.PAS.total.plus.bw
html https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/track_descriptions/PAS_tissue_TPM_plus.html
track PAS_brain_TPM_plus_strand
shortLabel brain
longLabel PAS brain TPM (+) strand
parent PAS_tissue_TPM_plus
color 4,177,216
type bigWig 0 22000
bigDataUrl https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/over_tissues/brain.PAS.total.plus.bw
html https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/track_descriptions/PAS_tissue_TPM_plus.html
track PAS_tissue_TPM_minus
visibility dense
shortLabel PAS tissue TPM (-) strand
longLabel PAS tissue TPM (-) strand
container multiWig
aggregate none
showSubtrackColorOnUi on
type bigWig 0 22000
viewLimits 0:22000
autoScale on
maxHeighPixels 120:60:8
html https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/track_descriptions/PAS_tissue_TPM_minus.html
track PAS_nose_TPM_minus_strand
shortLabel nose
longLabel PAS nose TPM (-) strand
parent PAS_tissue_TPM_minus
color 255,68,51
type bigWig 0 22000
bigDataUrl https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/over_tissues/nose.PAS.total.minus.bw
html https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/track_descriptions/PAS_tissue_TPM_minus.html
track PAS_trachea_TPM_minus_strand
shortLabel trachea
longLabel PAS trachea TPM (-) strand
parent PAS_tissue_TPM_minus
color 255,68,51
type bigWig 0 22000
bigDataUrl https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/over_tissues/trachea.PAS.total.minus.bw
html https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/track_descriptions/PAS_tissue_TPM_minus.html
track PAS_heart_TPM_minus_strand
shortLabel heart
longLabel PAS heart TPM (-) strand
parent PAS_tissue_TPM_minus
color 255,68,51
type bigWig 0 22000
bigDataUrl https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/over_tissues/heart.PAS.total.minus.bw
html https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/track_descriptions/PAS_tissue_TPM_minus.html
track PAS_intestine_TPM_minus_strand
shortLabel intestine
longLabel PAS intestine TPM (-) strand
parent PAS_tissue_TPM_minus
color 255,68,51
type bigWig 0 22000
bigDataUrl https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/over_tissues/intestine.PAS.total.minus.bw
html https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/track_descriptions/PAS_tissue_TPM_minus.html
track PAS_breast_TPM_minus_strand
shortLabel breast
longLabel PAS breast TPM (-) strand
parent PAS_tissue_TPM_minus
color 255,68,51
type bigWig 0 22000
bigDataUrl https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/over_tissues/breast.PAS.total.minus.bw
html https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/track_descriptions/PAS_tissue_TPM_minus.html
track PAS_bone_TPM_minus_strand
shortLabel bone
longLabel PAS bone TPM (-) strand
parent PAS_tissue_TPM_minus
color 255,68,51
type bigWig 0 22000
bigDataUrl https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/over_tissues/bone.PAS.total.minus.bw
html https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/track_descriptions/PAS_tissue_TPM_minus.html
track PAS_pancreas_TPM_minus_strand
shortLabel pancreas
longLabel PAS pancreas TPM (-) strand
parent PAS_tissue_TPM_minus
color 255,68,51
type bigWig 0 22000
bigDataUrl https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/over_tissues/pancreas.PAS.total.minus.bw
html https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/track_descriptions/PAS_tissue_TPM_minus.html
track PAS_eye_TPM_minus_strand
shortLabel eye
longLabel PAS eye TPM (-) strand
parent PAS_tissue_TPM_minus
color 255,68,51
type bigWig 0 22000
bigDataUrl https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/over_tissues/eye.PAS.total.minus.bw
html https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/track_descriptions/PAS_tissue_TPM_minus.html
track PAS_kidney_TPM_minus_strand
shortLabel kidney
longLabel PAS kidney TPM (-) strand
parent PAS_tissue_TPM_minus
color 255,68,51
type bigWig 0 22000
bigDataUrl https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/over_tissues/kidney.PAS.total.minus.bw
html https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/track_descriptions/PAS_tissue_TPM_minus.html
track PAS_penis_TPM_minus_strand
shortLabel penis
longLabel PAS penis TPM (-) strand
parent PAS_tissue_TPM_minus
color 255,68,51
type bigWig 0 22000
bigDataUrl https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/over_tissues/penis.PAS.total.minus.bw
html https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/track_descriptions/PAS_tissue_TPM_minus.html
track PAS_ureter_TPM_minus_strand
shortLabel ureter
longLabel PAS ureter TPM (-) strand
parent PAS_tissue_TPM_minus
color 255,68,51
type bigWig 0 22000
bigDataUrl https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/over_tissues/ureter.PAS.total.minus.bw
html https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/track_descriptions/PAS_tissue_TPM_minus.html
track PAS_lung_TPM_minus_strand
shortLabel lung
longLabel PAS lung TPM (-) strand
parent PAS_tissue_TPM_minus
color 255,68,51
type bigWig 0 22000
bigDataUrl https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/over_tissues/lung.PAS.total.minus.bw
html https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/track_descriptions/PAS_tissue_TPM_minus.html
track PAS_liver_TPM_minus_strand
shortLabel liver
longLabel PAS liver TPM (-) strand
parent PAS_tissue_TPM_minus
color 255,68,51
type bigWig 0 22000
bigDataUrl https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/over_tissues/liver.PAS.total.minus.bw
html https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/track_descriptions/PAS_tissue_TPM_minus.html
track PAS_skin_TPM_minus_strand
shortLabel skin
longLabel PAS skin TPM (-) strand
parent PAS_tissue_TPM_minus
color 255,68,51
type bigWig 0 22000
bigDataUrl https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/over_tissues/skin.PAS.total.minus.bw
html https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/track_descriptions/PAS_tissue_TPM_minus.html
track PAS_prostate_TPM_minus_strand
shortLabel prostate
longLabel PAS prostate TPM (-) strand
parent PAS_tissue_TPM_minus
color 255,68,51
type bigWig 0 22000
bigDataUrl https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/over_tissues/prostate.PAS.total.minus.bw
html https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/track_descriptions/PAS_tissue_TPM_minus.html
track PAS_uterus_TPM_minus_strand
shortLabel uterus
longLabel PAS uterus TPM (-) strand
parent PAS_tissue_TPM_minus
color 255,68,51
type bigWig 0 22000
bigDataUrl https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/over_tissues/uterus.PAS.total.minus.bw
html https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/track_descriptions/PAS_tissue_TPM_minus.html
track PAS_bloodImmune_TPM_minus_strand
shortLabel bloodImmune
longLabel PAS bloodImmune TPM (-) strand
parent PAS_tissue_TPM_minus
color 255,68,51
type bigWig 0 22000
bigDataUrl https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/over_tissues/bloodImmune.PAS.total.minus.bw
html https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/track_descriptions/PAS_tissue_TPM_minus.html
track PAS_brain_TPM_minus_strand
shortLabel brain
longLabel PAS brain TPM (-) strand
parent PAS_tissue_TPM_minus
color 255,68,51
type bigWig 0 22000
bigDataUrl https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/over_tissues/brain.PAS.total.minus.bw
html https://raw.githubusercontent.com/zavolanlab/polyAsite_Atlas_3/main/track_descriptions/PAS_tissue_TPM_minus.html